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NIPAL1 NIPA like domain containing 1 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100667897, updated on 11-Apr-2024

Summary

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Gene symbol
NIPAL1
Gene description
NIPA like domain containing 1
See related
EnsemblRapid:ENSLAFG00000042195
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 5 NC_087346.1 (108357483..108378537, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573458.1 (1805754..1825458)

Chromosome 5 - NC_087346.1Genomic Context describing neighboring genes Neighboring gene tec protein tyrosine kinase Neighboring gene zinc finger protein 410-like Neighboring gene TXK tyrosine kinase Neighboring gene cyclic nucleotide gated channel subunit alpha 1 Neighboring gene nuclear transcription factor, X-box binding like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in magnesium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
magnesium transporter NIPA3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087346.1 Reference mLoxAfr1.hap2

    Range
    108357483..108378537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003415923.4 → XP_003415971.1  magnesium transporter NIPA3

    UniProtKB/TrEMBL
    G3SLY0
    Related
    ENSLAFP00000029967.1, ENSLAFT00000047539.1
    Conserved Domains (2) summary
    COG0697
    Location:115 → 191
    RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
    cl23754
    Location:66 → 358
    EamA; EamA-like transporter family
Nucleotide Protein
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