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CCDC117 coiled-coil domain containing 117 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100664300, updated on 11-Apr-2024

Summary

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Gene symbol
CCDC117
Gene description
coiled-coil domain containing 117
See related
EnsemblRapid:ENSLAFG00000039613
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See CCDC117 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 19 NC_087360.1 (27668450..27691224, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573488.1 (5959146..5973751, complement)

Chromosome 19 - NC_087360.1Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein eL21-like Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene X-box binding protein 1 Neighboring gene HscB mitochondrial iron-sulfur cluster cochaperone Neighboring gene U6 spliceosomal RNA Neighboring gene checkpoint kinase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 117

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087360.1 Reference mLoxAfr1.hap2

    Range
    27668450..27691224 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003419088.4 → XP_003419136.1  coiled-coil domain-containing protein 117

    Related
    ENSLAFP00000031652.1, ENSLAFT00000063343.1
    Conserved Domains (1) summary
    pfam15810
    Location:139 → 268
    CCDC117; Coiled-coil domain-containing protein 117
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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