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HLF HLF transcription factor, PAR bZIP family member [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100663248, updated on 11-Apr-2024

Summary

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Gene symbol
HLF
Gene description
HLF transcription factor, PAR bZIP family member
See related
EnsemblRapid:ENSLAFG00000016475
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 18 NC_087359.1 (44383511..44446813)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573451.1 (13571444..13637312, complement)

Chromosome 18 - NC_087359.1Genomic Context describing neighboring genes Neighboring gene TOM1-like protein 1 Neighboring gene cytochrome c oxidase assembly protein COX11, mitochondrial Neighboring gene syntaxin binding protein 4 Neighboring gene monocyte to macrophage differentiation associated Neighboring gene small integral membrane protein 36

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hepatic leukemia factor
Names
HLF, PAR bZIP transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087359.1 Reference mLoxAfr1.hap2

    Range
    44383511..44446813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023553559.2 → XP_023409327.1  hepatic leukemia factor isoform X1

    Related
    ENSLAFP00000013836.2, ENSLAFT00000016475.2
    Conserved Domains (1) summary
    cd14695
    Location:226 → 284
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain

  2. XM_003414608.4 → XP_003414656.1  hepatic leukemia factor isoform X2

    UniProtKB/TrEMBL
    G3TH33
    Conserved Domains (1) summary
    cd14695
    Location:224 → 283
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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