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TBC1D2 TBC1 domain family member 2 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100658280, updated on 6-Jun-2024

Summary

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Gene symbol
TBC1D2
Gene description
TBC1 domain family member 2
See related
EnsemblRapid:ENSLAFG00000000598
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 9 NC_087350.1 (78465346..78521979)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573426.1 (61020552..61074316)

Chromosome 9 - NC_087350.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and sterile alpha motif domain containing 6 Neighboring gene tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase-like Neighboring gene gamma-aminobutyric acid type B receptor subunit 2 Neighboring gene C-type lectin domain family 1 member A-like Neighboring gene coronin 2A Neighboring gene tripartite motif containing 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
TBC1 domain family member 2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087350.1 Reference mLoxAfr1.hap2

    Range
    78465346..78521979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064291679.1 → XP_064147749.1  TBC1 domain family member 2A isoform X4

    UniProtKB/TrEMBL
    G3SM13

  2. XM_010588027.3 → XP_010586329.1  TBC1 domain family member 2A isoform X3

    UniProtKB/TrEMBL
    G3SM13
    Conserved Domains (5) summary
    smart00164
    Location:633 → 766
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cd01265
    Location:46 → 146
    PH_TBC1D2A; TBC1 domain family member 2A pleckstrin homology (PH) domain
    pfam00169
    Location:46 → 138
    PH; PH domain
    pfam14282
    Location:371 → 426
    FlxA; FlxA-like protein
    cl19864
    Location:300 → 414
    Mu-like_Pro; Mu-like prophage I protein

  3. XM_064291678.1 → XP_064147748.1  TBC1 domain family member 2A isoform X2

    UniProtKB/TrEMBL
    G3SM13
    Related
    ENSLAFP00000000503.4, ENSLAFT00000000598.4

  4. XM_064291677.1 → XP_064147747.1  TBC1 domain family member 2A isoform X1

    Related
    ENSLAFP00000044626.1, ENSLAFT00000040017.1

  5. XM_064291680.1 → XP_064147750.1  TBC1 domain family member 2A isoform X5

  6. XM_064291681.1 → XP_064147751.1  TBC1 domain family member 2A isoform X6

  7. XM_064291683.1 → XP_064147753.1  TBC1 domain family member 2A isoform X7

  8. XM_064291684.1 → XP_064147754.1  TBC1 domain family member 2A isoform X7

  9. XM_064291685.1 → XP_064147755.1  TBC1 domain family member 2A isoform X8

Nucleotide Protein
Heading Accession and Version

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