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PGK1 phosphoglycerate kinase 1 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100657075, updated on 11-Apr-2024

Summary

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Gene symbol
PGK1
Gene description
phosphoglycerate kinase 1
See related
EnsemblRapid:ENSLAFG00000011954
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) X NC_087369.1 (89229070..89251082)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573444.1 (22994910..23016843, complement)

Chromosome X - NC_087369.1Genomic Context describing neighboring genes Neighboring gene ATPase copper transporting alpha Neighboring gene ATP synthase subunit f, mitochondrial-like Neighboring gene toll-like receptor 13 Neighboring gene TATA-box binding protein associated factor 9b Neighboring gene cysteinyl leukotriene receptor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoglycerate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoglycerate kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087369.1 Reference mLoxAfr1.hap2

    Range
    89229070..89251082
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003412710.4 → XP_003412758.1  phosphoglycerate kinase 1 isoform X1

    UniProtKB/TrEMBL
    G3T8H2
    Related
    ENSLAFP00000031917.1, ENSLAFT00000051577.1
    Conserved Domains (1) summary
    PTZ00005
    Location:3 → 416
    PTZ00005; phosphoglycerate kinase; Provisional

  2. XM_064278584.1 → XP_064134654.1  phosphoglycerate kinase 1 isoform X2

    Related
    ENSLAFP00000009988.4, ENSLAFT00000011952.4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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