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DDX28 DEAD-box helicase 28 [ Sus scrofa (pig) ]

Gene ID: 100621490, updated on 8-Mar-2024

Summary

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Official Symbol
DDX28provided by VGNC
Official Full Name
DEAD-box helicase 28provided by VGNC
Primary source
VGNC:VGNC:87218
See related
Ensembl:ENSSSCG00000026038
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Orthologs
human mouse all
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Genomic context

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See DDX28 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (28615461..28617443, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 6 NC_010448.3 (26002074..26003953)

Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106507567 Neighboring gene DPEP2 neighbor Neighboring gene dihydrouridine synthase 2 Neighboring gene nuclear factor of activated T cells 3 Neighboring gene epithelial splicing regulatory protein 2 Neighboring gene phospholipase A2 group XV

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial large ribosomal subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX28

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

    Range
    28615461..28617443 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003355776.4 → XP_003355824.1  probable ATP-dependent RNA helicase DDX28

    UniProtKB/TrEMBL
    A0A4X1UGF4, A0A8D0INU6, A0A8D1IMR3, A0A8D2CFI1, I3LB32
    Related
    ENSSSCP00000021251.1, ENSSSCT00000027762.3
    Conserved Domains (3) summary
    PRK01297
    Location:27 → 540
    PRK01297; ATP-dependent RNA helicase RhlB; Provisional
    pfam00271
    Location:376 → 492
    Helicase_C; Helicase conserved C-terminal domain
    cl21455
    Location:128 → 343
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials