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TRPC4AP transient receptor potential cation channel subfamily C member 4 associated protein [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100605696, updated on 8-Mar-2024

Summary

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Gene symbol
TRPC4AP
Gene description
transient receptor potential cation channel subfamily C member 4 associated protein
See related
EnsemblRapid:ENSNLEG00000010157
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
20
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 13 NC_044393.1 (28950580..29044382)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 13 NC_019828.1 (29819996..29910994)

Chromosome 13 - NC_044393.1Genomic Context describing neighboring genes Neighboring gene protein C receptor Neighboring gene ER degradation-enhancing alpha-mannosidase-like protein 2 Neighboring gene small nucleolar RNA SNORD56 Neighboring gene U6 spliceosomal RNA Neighboring gene myosin heavy chain 7B Neighboring gene glutathione synthetase Neighboring gene acyl-CoA synthetase short chain family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4A-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
short transient receptor potential channel 4-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044393.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    28950580..29044382
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030825876.1 → XP_030681736.1  short transient receptor potential channel 4-associated protein isoform X3

    UniProtKB/TrEMBL
    G1RGQ1
    Conserved Domains (1) summary
    pfam12463
    Location:352 → 657
    DUF3689; Protein of unknown function (DUF3689)

  2. XM_030825874.1 → XP_030681734.1  short transient receptor potential channel 4-associated protein isoform X1

    UniProtKB/TrEMBL
    G1RGQ1
    Related
    ENSNLEP00000012401.3, ENSNLET00000013006.4
    Conserved Domains (1) summary
    pfam12463
    Location:407 → 712
    DUF3689; Protein of unknown function (DUF3689)

  3. XM_030825875.1 → XP_030681735.1  short transient receptor potential channel 4-associated protein isoform X2

    UniProtKB/TrEMBL
    G1RGQ1
    Conserved Domains (1) summary
    pfam12463
    Location:399 → 704
    DUF3689; Protein of unknown function (DUF3689)
Nucleotide Protein
Heading Accession and Version

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