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TTC39C tetratricopeptide repeat domain 39C [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100600922, updated on 8-Mar-2024

Summary

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Gene symbol
TTC39C
Gene description
tetratricopeptide repeat domain 39C
See related
EnsemblRapid:ENSNLEG00000006631
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 4 NC_044384.1 (55721273..55842587, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 4 NC_019819.1 (56662687..56811159, complement)

Chromosome 4 - NC_044384.1Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein like 1A Neighboring gene 5S ribosomal RNA Neighboring gene U5 spliceosomal RNA Neighboring gene calcium binding tyrosine phosphorylation regulated Neighboring gene laminin subunit alpha 3 Neighboring gene 40S ribosomal protein S10 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in otolith morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetratricopeptide repeat protein 39C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044384.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    55721273..55842587 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012506333.2 → XP_012361787.2  tetratricopeptide repeat protein 39C isoform X1

    UniProtKB/TrEMBL
    A0A2I3HR22
    Related
    ENSNLEP00000008070.3, ENSNLET00000008456.3
    Conserved Domains (1) summary
    pfam10300
    Location:34 → 498
    DUF3808; Protein of unknown function (DUF3808)

  2. XM_030810641.1 → XP_030666501.1  tetratricopeptide repeat protein 39C isoform X2

    UniProtKB/TrEMBL
    A0A2I3HR22
    Conserved Domains (1) summary
    pfam10300
    Location:34 → 498
    DUF3808; Protein of unknown function (DUF3808)

  3. XM_012506334.2 → XP_012361788.1  tetratricopeptide repeat protein 39C isoform X4

    Conserved Domains (1) summary
    pfam10300
    Location:11 → 192
    DUF3808; Protein of unknown function (DUF3808)

  4. XM_030810642.1 → XP_030666502.1  tetratricopeptide repeat protein 39C isoform X3

    Related
    ENSNLEP00000060856.1, ENSNLET00000063223.1
    Conserved Domains (1) summary
    pfam10300
    Location:34 → 59
    DUF3808; Protein of unknown function (DUF3808)
Nucleotide Protein
Heading Accession and Version

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