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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001135993.2 → NP_001129465.1 tetratricopeptide repeat protein 39C isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC010754, AC090772, KF456356
- Consensus CDS
-
CCDS45839.1
- UniProtKB/Swiss-Prot
- B7WP63, J3QRR1, Q0VAJ2, Q8N284, Q8N584
- Related
- ENSP00000323645.3, ENST00000317571.8
- Conserved Domains (1) summary
-
- pfam10300
Location:34 → 498
- DUF3808; Protein of unknown function (DUF3808)
-
NM_001243425.2 → NP_001230354.1 tetratricopeptide repeat protein 39C isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 3' UTR and lacks a large portion of the 3' coding region, compared to variant 1. The encoded isoform (3) is significantly shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
BC016833
- Consensus CDS
-
CCDS58616.1
- UniProtKB/Swiss-Prot
-
Q8N584
- Related
- ENSP00000464344.1, ENST00000584250.1
- Conserved Domains (1) summary
-
- pfam10300
Location:34 → 58
- DUF3808; Protein of unknown function (DUF3808)
-
NM_001292030.2 → NP_001278959.1 tetratricopeptide repeat protein 39C isoform 4 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks part of the 5' coding region, contains an alternate 5'-terminal exon, and uses an alternate start codon, compared to variant 1. The encoded isoform (4) has a shorter and distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC090772, KF456356
- Consensus CDS
-
CCDS77165.1
- UniProtKB/TrEMBL
- B7Z3X0, G3V1P2
- Related
- ENSP00000443016.1, ENST00000540918.2
- Conserved Domains (1) summary
-
- pfam10300
Location:11 → 191
- DUF3808; Protein of unknown function (DUF3808)
-
NM_153211.4 → NP_694943.2 tetratricopeptide repeat protein 39C isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) contains a distinct 5' UTR, lacks an in-frame portion of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. The resulting isoform (2) has a shorter N-terminus compared to isoform 1.
- Source sequence(s)
-
AC010754, AC090772, KF456356
- Consensus CDS
-
CCDS32804.1
- UniProtKB/Swiss-Prot
-
Q8N584
- Related
- ENSP00000306598.6, ENST00000304621.10
- Conserved Domains (1) summary
-
- pfam10300
Location:1 → 437
- DUF3808; Protein of unknown function (DUF3808)