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TBC1D9 TBC1 domain family member 9 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100596374, updated on 8-Mar-2024

Summary

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Gene symbol
TBC1D9
Gene description
TBC1 domain family member 9
See related
EnsemblRapid:ENSNLEG00000005185
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7b
Exon count:
22
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 7b NC_044387.1 (61586573..61721252, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 7b NC_019822.1 (64428864..64565516, complement)

Chromosome 7b - NC_044387.1Genomic Context describing neighboring genes Neighboring gene ELMO domain containing 2 Neighboring gene uncoupling protein 1 Neighboring gene ring finger protein 150 Neighboring gene zinc finger protein 330

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TBC1 domain family member 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044387.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    61586573..61721252 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003257743.3 → XP_003257791.1  TBC1 domain family member 9 isoform X1

    UniProtKB/TrEMBL
    A0A2I3GZE3, G1QZE4
    Related
    ENSNLEP00000006315.1, ENSNLET00000006637.4
    Conserved Domains (4) summary
    smart00164
    Location:512 → 722
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cd13354
    Location:304 → 399
    PH-GRAM2_TCB1D9_TCB1D9B; TBC1 domain family members 9 and 9B (TBC1D9 and TBC1D9B) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 2
    cd13351
    Location:157 → 255
    PH-GRAM1_TCB1D9_TCB1D9B; TBC1 domain family members 9 and 9B (TBC1D9 and TBC1D9B) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 1
    cl08302
    Location:893 → 923
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  2. XM_030816182.1 → XP_030672042.1  TBC1 domain family member 9 isoform X2

    UniProtKB/TrEMBL
    A0A2I3GZE3
    Conserved Domains (4) summary
    smart00164
    Location:359 → 569
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cd13354
    Location:151 → 246
    PH-GRAM2_TCB1D9_TCB1D9B; TBC1 domain family members 9 and 9B (TBC1D9 and TBC1D9B) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 2
    cd13351
    Location:4 → 102
    PH-GRAM1_TCB1D9_TCB1D9B; TBC1 domain family members 9 and 9B (TBC1D9 and TBC1D9B) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 1
    cl08302
    Location:740 → 770
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Nucleotide Protein
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