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CDH10 cadherin 10 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100591520, updated on 8-Mar-2024

Summary

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Gene symbol
CDH10
Gene description
cadherin 10
See related
EnsemblRapid:ENSNLEG00000012000
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 6 NC_044386.1 (22748846..22903902, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 6 NC_019821.1 (22985382..23141229, complement)

Chromosome 6 - NC_044386.1Genomic Context describing neighboring genes Neighboring gene tyrosine-protein phosphatase non-receptor type 11 pseudogene Neighboring gene PR/SET domain 7 Neighboring gene uncharacterized LOC115835376 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adherens junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cadherin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044386.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    22748846..22903902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030813936.1 → XP_030669796.1  cadherin-10 isoform X2

  2. XM_003263183.2 → XP_003263231.1  cadherin-10 isoform X1

    UniProtKB/TrEMBL
    G1RMW8
    Related
    ENSNLEP00000014582.1, ENSNLET00000015308.3
    Conserved Domains (3) summary
    cd11304
    Location:164 → 265
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:80 → 158
    CA; Cadherin repeats
    pfam01049
    Location:635 → 782
    Cadherin_C; Cadherin cytoplasmic region
Nucleotide Protein
Heading Accession and Version

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