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IMP4 IMP U3 small nucleolar ribonucleoprotein 4 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100588603, updated on 8-Mar-2024

Summary

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Gene symbol
IMP4
Gene description
IMP U3 small nucleolar ribonucleoprotein 4
See related
EnsemblRapid:ENSNLEG00000010574
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 20 NC_044400.1 (36598738..36604574, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 20 NC_019835.1 (37201463..37205944, complement)

Chromosome 20 - NC_044400.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing B2 Neighboring gene protein tyrosine phosphatase non-receptor type 18 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene coiled-coil domain containing 115

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA primary transcript binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Mpp10 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U3 small nucleolar ribonucleoprotein protein IMP4
Names
IMP4 homolog, U3 small nucleolar ribonucleoprotein
IMP4, U3 small nucleolar ribonucleoprotein, homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044400.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    36598738..36604574 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030801000.1 → XP_030656860.1  U3 small nucleolar ribonucleoprotein protein IMP4 isoform X1

    Conserved Domains (2) summary
    smart00879
    Location:204 → 399
    Brix; The Brix domain is found in a number of eukaryotic proteins
    pfam16515
    Location:134 → 190
    HIP1_clath_bdg; Clathrin-binding domain of Huntingtin-interacting protein 1

  2. XM_003281746.4 → XP_003281794.1  U3 small nucleolar ribonucleoprotein protein IMP4 isoform X2

    UniProtKB/TrEMBL
    G1RI43
    Related
    ENSNLEP00000012899.4, ENSNLET00000013533.3
    Conserved Domains (2) summary
    smart00879
    Location:204 → 371
    Brix; The Brix domain is found in a number of eukaryotic proteins
    pfam16515
    Location:134 → 190
    HIP1_clath_bdg; Clathrin-binding domain of Huntingtin-interacting protein 1
Nucleotide Protein
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