U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MTCL2 microtubule crosslinking factor 2 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100588417, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
MTCL2
Gene description
microtubule crosslinking factor 2
See related
EnsemblRapid:ENSNLEG00000006153
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Also known as
SOGA1
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 13
Exon count:
16
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 13 NC_044393.1 (27164679..27261118)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 13 NC_019828.1 (27989341..28070958)

Chromosome 13 - NC_044393.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-40S ribosomal protein S27a pseudogene Neighboring gene RB transcriptional corepressor like 1 Neighboring gene SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 Neighboring gene TBC/LysM-associated domain containing 2 Neighboring gene DSN1 component of MIS12 kinetochore complex Neighboring gene NDRG family member 3 Neighboring gene 40S ribosomal protein S2 pseudogene Neighboring gene Src like adaptor 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in insulin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein SOGA1
Names
suppressor of glucose, autophagy associated 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044393.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    27164679..27261118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030826859.1 → XP_030682719.1  protein SOGA1 isoform X1

    UniProtKB/TrEMBL
    G1R2P6
    Related
    ENSNLEP00000007468.3, ENSNLET00000007834.3

  2. XM_030826861.1 → XP_030682721.1  protein SOGA1 isoform X3

    UniProtKB/TrEMBL
    G1R2P6
    Conserved Domains (5) summary
    COG1196
    Location:216 → 552
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    PRK07003
    Location:5 → 196
    PRK07003; DNA polymerase III subunit gamma/tau
    TIGR02168
    Location:249 → 1095
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam11365
    Location:380 → 474
    SOGA; Protein SOGA
    pfam14818
    Location:1022 → 1162
    DUF4482; Domain of unknown function (DUF4482)

  3. XM_030826860.1 → XP_030682720.1  protein SOGA1 isoform X2

    UniProtKB/TrEMBL
    G1R2P6
    Conserved Domains (5) summary
    COG1196
    Location:212 → 466
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    PRK07003
    Location:5 → 196
    PRK07003; DNA polymerase III subunit gamma/tau
    TIGR02168
    Location:253 → 1121
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam11365
    Location:359 → 453
    SOGA; Protein SOGA
    pfam14818
    Location:1048 → 1188
    DUF4482; Domain of unknown function (DUF4482)

RNA

  1. XR_004033118.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.