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capn8 calpain 8 [ Anolis carolinensis (green anole) ]

Gene ID: 100561614, updated on 6-Jun-2024

Summary

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Gene symbol
capn8
Gene description
calpain 8
See related
Ensembl:ENSACAG00000002512
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 1 NC_085841.1 (37440182..37496918, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 1 NC_014776.1 (244996204..245049408, complement)

Chromosome 1 - NC_085841.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134296766 Neighboring gene sushi domain containing 4 Neighboring gene calpain-2 catalytic subunit Neighboring gene uncharacterized LOC134296780 Neighboring gene tumor protein p53 binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpain-8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085841.1 Reference rAnoCar3.1.pri

    Range
    37440182..37496918 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008125885.3 → XP_008124092.2  calpain-8

    UniProtKB/TrEMBL
    G1KBL7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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