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snai2 snail family transcriptional repressor 2 [ Anolis carolinensis (green anole) ]

Gene ID: 100560272, updated on 8-Mar-2024

Summary

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Gene symbol
snai2
Gene description
snail family transcriptional repressor 2
See related
Ensembl:ENSACAG00000012332
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 4 NC_085844.1 (49704981..49709730)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003338754.1 (1067550..1072303)

Chromosome 4 - NC_085844.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134298877 Neighboring gene uncharacterized LOC107983102 Neighboring gene uncharacterized LOC134298612 Neighboring gene chloride channel protein C Neighboring gene uncharacterized LOC103279489

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein SNAI2
Names
snail family zinc finger 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085844.1 Reference rAnoCar3.1.pri

    Range
    49704981..49709730
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003223506.4 → XP_003223554.1  zinc finger protein SNAI2

    UniProtKB/TrEMBL
    H9GIS1
    Related
    ENSACAP00000012079.2
    Conserved Domains (4) summary
    COG5048
    Location:38 → 258
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:187 → 207
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:213 → 235
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:200 → 223
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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