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rundc3a RUN domain containing 3A [ Anolis carolinensis (green anole) ]

Gene ID: 100558348, updated on 8-Mar-2024

Summary

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Gene symbol
rundc3a
Gene description
RUN domain containing 3A
See related
Ensembl:ENSACAG00000017290
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See rundc3a in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 6 NC_085846.1 (35416526..35456896, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 6 NC_014781.1 (66863680..66897701)

Chromosome 6 - NC_085846.1Genomic Context describing neighboring genes Neighboring gene KAT8 regulatory NSL complex subunit 1 Neighboring gene microtubule associated protein tau Neighboring gene solute carrier family 25 member 39 Neighboring gene solute carrier family 4 member 1 (Diego blood group) Neighboring gene upstream binding transcription factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RUN domain-containing protein 3A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085846.1 Reference rAnoCar3.1.pri

    Range
    35416526..35456896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008113286.3 → XP_008111493.1  RUN domain-containing protein 3A isoform X4

    Conserved Domains (2) summary
    pfam02759
    Location:60 → 186
    RUN; RUN domain
    cl21712
    Location:277 → 383
    T4SC; Type IV pilus biogenesis

  2. XM_008113282.3 → XP_008111489.1  RUN domain-containing protein 3A isoform X1

    Conserved Domains (2) summary
    pfam02759
    Location:60 → 186
    RUN; RUN domain
    pfam04880
    Location:253 → 393
    NUDE_C; NUDE protein, C-terminal conserved region

  3. XM_008113287.3 → XP_008111494.1  RUN domain-containing protein 3A isoform X5

    Conserved Domains (2) summary
    pfam02759
    Location:60 → 186
    RUN; RUN domain
    cl21712
    Location:276 → 382
    T4SC; Type IV pilus biogenesis

  4. XM_008113283.3 → XP_008111490.1  RUN domain-containing protein 3A isoform X2

    UniProtKB/TrEMBL
    G1KTQ3
    Related
    ENSACAP00000017024.3
    Conserved Domains (2) summary
    pfam02759
    Location:60 → 186
    RUN; RUN domain
    pfam04880
    Location:252 → 392
    NUDE_C; NUDE protein, C-terminal conserved region

  5. XM_008113285.2 → XP_008111492.1  RUN domain-containing protein 3A isoform X3

    UniProtKB/TrEMBL
    A0A803T4S8
    Related
    ENSACAP00000030218.1
    Conserved Domains (1) summary
    pfam02759
    Location:60 → 186
    RUN; RUN domain

  6. XM_062983767.1 → XP_062839837.1  RUN domain-containing protein 3A isoform X6

Nucleotide Protein
Heading Accession and Version

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