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nr2c2 nuclear receptor subfamily 2 group C member 2 [ Anolis carolinensis (green anole) ]

Gene ID: 100554284, updated on 6-Jun-2024

Summary

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Gene symbol
nr2c2
Gene description
nuclear receptor subfamily 2 group C member 2
See related
Ensembl:ENSACAG00000012082
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See nr2c2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 2 NC_085842.1 (59367647..59432401, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 2 NC_014777.1 (170784106..170839407)

Chromosome 2 - NC_085842.1Genomic Context describing neighboring genes Neighboring gene rabenosyn, RAB effector Neighboring gene mitochondrial ribosomal protein S25 Neighboring gene uncharacterized LOC103277958 Neighboring gene FYVE, RhoGEF and PH domain containing 5 Neighboring gene uncharacterized LOC103277957

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor subfamily 2 group C member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085842.1 Reference rAnoCar3.1.pri

    Range
    59367647..59432401 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008105317.3 → XP_008103524.1  nuclear receptor subfamily 2 group C member 2 isoform X2

    UniProtKB/TrEMBL
    A0A803TN25
    Conserved Domains (2) summary
    cd06952
    Location:391 → 612
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:142 → 228
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  2. XM_008105316.3 → XP_008103523.1  nuclear receptor subfamily 2 group C member 2 isoform X1

    See identical proteins and their annotated locations for XP_008103523.1

    UniProtKB/TrEMBL
    A0A803TN25, G1KM19
    Conserved Domains (2) summary
    cd06952
    Location:394 → 615
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:145 → 231
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  3. XM_003217743.4 → XP_003217791.1  nuclear receptor subfamily 2 group C member 2 isoform X1

    See identical proteins and their annotated locations for XP_003217791.1

    UniProtKB/TrEMBL
    A0A803TN25, G1KM19
    Related
    ENSACAP00000012023.3
    Conserved Domains (2) summary
    cd06952
    Location:394 → 615
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:145 → 231
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  4. XM_062969780.1 → XP_062825850.1  nuclear receptor subfamily 2 group C member 2 isoform X2

    UniProtKB/TrEMBL
    A0A803TN25

  5. XM_062969779.1 → XP_062825849.1  nuclear receptor subfamily 2 group C member 2 isoform X2

    UniProtKB/TrEMBL
    A0A803TN25

  6. XM_062969778.1 → XP_062825848.1  nuclear receptor subfamily 2 group C member 2 isoform X1

    UniProtKB/TrEMBL
    A0A803TN25, G1KM19

  7. XM_062969781.1 → XP_062825851.1  nuclear receptor subfamily 2 group C member 2 isoform X3

    UniProtKB/TrEMBL
    A0A803TN25

  8. XM_062969782.1 → XP_062825852.1  nuclear receptor subfamily 2 group C member 2 isoform X4

    UniProtKB/TrEMBL
    A0A803TN25
Nucleotide Protein
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