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rab5a RAB5A, member RAS oncogene family [ Anolis carolinensis (green anole) ]

Gene ID: 100552994, updated on 8-Mar-2024

Summary

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Gene symbol
rab5a
Gene description
RAB5A, member RAS oncogene family
See related
Ensembl:ENSACAG00000000017
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 6 NC_085846.1 (77939619..77962507, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 6 NC_014781.1 (32945889..32967649, complement)

Chromosome 6 - NC_085846.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134300016 Neighboring gene shugoshin 1 Neighboring gene lysine acetyltransferase 2B Neighboring gene protein phosphatase 2C like domain containing 1 Neighboring gene EF-hand domain family member B Neighboring gene uncharacterized LOC134300015 Neighboring gene potassium voltage-gated channel subfamily H member 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-5A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085846.1 Reference rAnoCar3.1.pri

    Range
    77939619..77962507 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062984581.1 → XP_062840651.1  ras-related protein Rab-5A isoform X2

  2. XM_003222161.4 → XP_003222209.1  ras-related protein Rab-5A isoform X1

    See identical proteins and their annotated locations for XP_003222209.1

    UniProtKB/TrEMBL
    G1K852
    Related
    ENSACAP00000000016.2
    Conserved Domains (2) summary
    cd01860
    Location:20 → 182
    Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion
    pfam00071
    Location:22 → 183
    Ras; Ras family
Nucleotide Protein
Heading Accession and Version

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