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VCP valosin containing protein [ Meleagris gallopavo (turkey) ]

Gene ID: 100548376, updated on 8-Mar-2024

Summary

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Gene symbol
VCP
Gene description
valosin containing protein
See related
Ensembl:ENSMGAG00000002491
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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See VCP in Genome Data Viewer
Location:
chromosome: Z
Exon count:
17
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) Z NC_015041.2 (7342281..7378520)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) Unplaced Scaffold NW_003454946.1 (595..5321, complement)

Chromosome Z - NC_015041.2Genomic Context describing neighboring genes Neighboring gene C-C motif chemokine 21 Neighboring gene C-C motif chemokine ligand 19 Neighboring gene phospholipid-transporting ATPase FetA-like Neighboring gene protein unc-13 homolog B-like Neighboring gene protein unc-13 homolog B-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle disassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde protein transport, ER to cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of VCP-NPL4-UFD1 AAA ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transitional endoplasmic reticulum ATPase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015041.2 Reference Turkey_5.1 Primary Assembly

    Range
    7342281..7378520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019610324.2 → XP_019465869.1  transitional endoplasmic reticulum ATPase isoform X1

    Conserved Domains (1) summary
    TIGR01243
    Location:25 → 767
    CDC48; AAA family ATPase, CDC48 subfamily

  2. XM_010725226.3 → XP_010723528.1  transitional endoplasmic reticulum ATPase isoform X2

    UniProtKB/TrEMBL
    G1MUF5
    Related
    ENSMGAP00000002157.3, ENSMGAT00000002831.3
    Conserved Domains (1) summary
    TIGR01243
    Location:25 → 764
    CDC48; AAA family ATPase, CDC48 subfamily
Nucleotide Protein
Heading Accession and Version

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