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TAF5 TATA-box binding protein associated factor 5 [ Meleagris gallopavo (turkey) ]

Gene ID: 100540949, updated on 8-Mar-2024

Summary

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Gene symbol
TAF5
Gene description
TATA-box binding protein associated factor 5
See related
Ensembl:ENSMGAG00000010475
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 8 NC_015018.2 (22951081..22961085)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 8 NC_015018.1 (25942057..25950539)

Chromosome 8 - NC_015018.2Genomic Context describing neighboring genes Neighboring gene internexin neuronal intermediate filament protein alpha Neighboring gene polycomb group ring finger 6 Neighboring gene ATP synthase membrane subunit k Neighboring gene programmed cell death 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription initiation factor TFIID subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015018.2 Reference Turkey_5.1 Primary Assembly

    Range
    22951081..22961085
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010714751.3 → XP_010713053.1  transcription initiation factor TFIID subunit 5

    UniProtKB/TrEMBL
    G1NDF6
    Related
    ENSMGAP00000010883.1, ENSMGAT00000011748.2
    Conserved Domains (3) summary
    cd00200
    Location:317 → 587
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:318 → 386
    7WD40; WD40 repeat [structural motif]
    pfam04494
    Location:54 → 182
    TFIID_NTD2; WD40 associated region in TFIID subunit, NTD2 domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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