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SNX1 sorting nexin 1 [ Meleagris gallopavo (turkey) ]

Gene ID: 100540029, updated on 8-Mar-2024

Summary

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Gene symbol
SNX1
Gene description
sorting nexin 1
See related
Ensembl:ENSMGAG00000001289
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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See SNX1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 12 NC_015022.2 (519504..530311, complement)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 12 NC_015022.1 (596216..607915, complement)

Chromosome 12 - NC_015022.2Genomic Context describing neighboring genes Neighboring gene peptidylprolyl isomerase B Neighboring gene sorting nexin 22 Neighboring gene PAT1 homolog 2 Neighboring gene beta-2-microglobulin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in early endosome to Golgi transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015022.2 Reference Turkey_5.1 Primary Assembly

    Range
    519504..530311 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003209309.4 → XP_003209357.1  sorting nexin-1

    UniProtKB/TrEMBL
    G1MRD1
    Related
    ENSMGAP00000000728.2, ENSMGAT00000001374.2
    Conserved Domains (3) summary
    cd07665
    Location:278 → 511
    BAR_SNX1; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 1
    pfam03700
    Location:27 → 119
    Sorting_nexin; Sorting nexin, N-terminal domain
    cl02563
    Location:137 → 260
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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