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NDUFA5 NADH:ubiquinone oxidoreductase subunit A5 [ Sus scrofa (pig) ]

Gene ID: 100525371, updated on 8-Mar-2024

Summary

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Official Symbol
NDUFA5provided by VGNC
Official Full Name
NADH:ubiquinone oxidoreductase subunit A5provided by VGNC
Primary source
VGNC:VGNC:110309
See related
Ensembl:ENSSSCG00000037869
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in heart (RPKM 60.0), psoas major muscle (RPKM 48.7) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See NDUFA5 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
5
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 18 NC_010460.4 (23881872..23896699)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 18 NC_010460.3 (25478874..25492248)

Chromosome 18 - NC_010460.4Genomic Context describing neighboring genes Neighboring gene leiomodin 2 Neighboring gene ankyrin repeat and SOCS box containing 15 Neighboring gene IQ motif and ubiquitin domain containing Neighboring gene solute carrier family 13 member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in respiratory electron transport chain IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial respiratory chain complex I IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010460.4 Reference Sscrofa11.1 Primary Assembly

    Range
    23881872..23896699
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003134727.3 → XP_003134775.1  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 isoform X1

    UniProtKB/TrEMBL
    A0A287BAW0, A0A4X1VWT5, A0A8D0UWW0, A0A8D1IJ52
    Related
    ENSSSCP00000053477.2, ENSSSCT00000060874.3
    Conserved Domains (1) summary
    pfam04716
    Location:13 → 78
    ETC_C1_NDUFA5; ETC complex I subunit conserved region

  2. XM_013985659.2 → XP_013841113.1  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 isoform X2

    UniProtKB/TrEMBL
    A0A8D1CFH6, A0A8W4FPL6
    Related
    ENSSSCP00000081143.1, ENSSSCT00000095343.1
Nucleotide Protein
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