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TATDN2 TatD DNase domain containing 2 [ Sus scrofa (pig) ]

Gene ID: 100523281, updated on 8-Mar-2024

Summary

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Official Symbol
TATDN2provided by VGNC
Official Full Name
TatD DNase domain containing 2provided by VGNC
Primary source
VGNC:VGNC:110221
See related
Ensembl:ENSSSCG00000011569
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in ovary (RPKM 9.7), spleen (RPKM 5.8) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
8
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 13 NC_010455.5 (66421472..66441978)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 13 NC_010455.4 (73484191..73504649, complement)

Chromosome 13 - NC_010455.5Genomic Context describing neighboring genes Neighboring gene von Hippel-Lindau tumor suppressor Neighboring gene interleukin 1 receptor associated kinase 2 Neighboring gene ghrelin and obestatin prepropeptide Neighboring gene SEC13 homolog, nuclear pore and COPII coat complex component

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: putative deoxyribonuclease TATDN2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010455.5 Reference Sscrofa11.1 Primary Assembly

    Range
    66421472..66441978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003132363.6 → XP_003132411.4  LOW QUALITY PROTEIN: putative deoxyribonuclease TATDN2

    UniProtKB/TrEMBL
    A0A8D0J6H8
    Related
    ENSSSCP00000012328.4, ENSSSCT00000012661.5
    Conserved Domains (1) summary
    pfam01026
    Location:476 → 740
    TatD_DNase; TatD related DNase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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