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GNL3L G protein nucleolar 3 like [ Sus scrofa (pig) ]

Gene ID: 100521120, updated on 8-Mar-2024

Summary

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Official Symbol
GNL3Lprovided by VGNC
Official Full Name
G protein nucleolar 3 likeprovided by VGNC
Primary source
VGNC:VGNC:88541
See related
Ensembl:ENSSSCG00000012336
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in kidney (RPKM 26.5), ovary (RPKM 24.1) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See GNL3L in Genome Data Viewer
Location:
chromosome: X
Exon count:
16
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) X NC_010461.5 (47256467..47284520)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) X NC_010461.4 (53113296..53141321)

Chromosome X - NC_010461.5Genomic Context describing neighboring genes Neighboring gene WNK lysine deficient protein kinase 3 Neighboring gene TSR2 ribosome maturation factor Neighboring gene FYVE, RhoGEF and PH domain containing 1 Neighboring gene T-complex protein 1 subunit zeta-like Neighboring gene 60S ribosomal protein L7a-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanine nucleotide-binding protein-like 3-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010461.5 Reference Sscrofa11.1 Primary Assembly

    Range
    47256467..47284520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005673659.3 → XP_005673716.1  guanine nucleotide-binding protein-like 3-like protein

    UniProtKB/TrEMBL
    A0A4X1W3X9, A0A8D0JQW7
    Related
    ENSSSCP00000029757.3, ENSSSCT00000033988.4
    Conserved Domains (3) summary
    cd04178
    Location:129 → 300
    Nucleostemin_like; A circularly permuted subfamily of the Ras GTPases
    TIGR03596
    Location:119 → 395
    GTPase_YlqF; ribosome biogenesis GTP-binding protein YlqF
    cl21455
    Location:246 → 371
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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