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TEX29 testis expressed 29 [ Sus scrofa (pig) ]

Gene ID: 100516692, updated on 8-Mar-2024

Summary

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Official Symbol
TEX29provided by VGNC
Official Full Name
testis expressed 29provided by VGNC
Primary source
VGNC:VGNC:93897
See related
Ensembl:ENSSSCG00000061055
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Low expression observed in reference dataset See more
Orthologs
human mouse all
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Genomic context

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See TEX29 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 11 NC_010453.5 (77531858..77555300)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 11 NC_010453.4 (85007696..85021731)

Chromosome 11 - NC_010453.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102167979 Neighboring gene Rho guanine nucleotide exchange factor 7 Neighboring gene collagen alpha-1(I) chain-like Neighboring gene SRY-box transcription factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
testis-expressed protein 29
Names
testis-expressed sequence 29 protein
uncharacterized protein C13orf16 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010453.5 Reference Sscrofa11.1 Primary Assembly

    Range
    77531858..77555300
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005653830.3 → XP_005653887.1  testis-expressed protein 29 isoform X1

    See identical proteins and their annotated locations for XP_005653887.1

    UniProtKB/TrEMBL
    A0A8D0RE96, A0A8D1IQ18, A0A8W4FMH0
    Related
    ENSSSCP00000080546.1, ENSSSCT00000096926.1
    Conserved Domains (1) summary
    pfam15839
    Location:13 → 88
    TEX29; Testis-expressed sequence 29 protein

  2. XM_003131097.4 → XP_003131145.1  testis-expressed protein 29 isoform X2

    UniProtKB/TrEMBL
    A0A8D0RE96
    Conserved Domains (1) summary
    pfam15839
    Location:13 → 88
    TEX29; Testis-expressed sequence 29 protein

RNA

  1. XR_002336779.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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