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ABHD18 abhydrolase domain containing 18 [ Sus scrofa (pig) ]

Gene ID: 100516683, updated on 8-Mar-2024

Summary

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Official Symbol
ABHD18provided by VGNC
Official Full Name
abhydrolase domain containing 18provided by VGNC
Primary source
VGNC:VGNC:84979
See related
Ensembl:ENSSSCG00000009074
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in psoas major muscle (RPKM 6.0), heart (RPKM 4.5) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See ABHD18 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
13
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 8 NC_010450.4 (96887464..96924862, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 8 NC_010450.3 (103755770..103791881, complement)

Chromosome 8 - NC_010450.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102166663 Neighboring gene progesterone receptor membrane component 2 Neighboring gene La ribonucleoprotein 1B Neighboring gene major facilitator superfamily domain containing 8 Neighboring gene polo like kinase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
LOW QUALITY PROTEIN: protein ABHD18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010450.4 Reference Sscrofa11.1 Primary Assembly

    Range
    96887464..96924862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013978904.2 → XP_013834358.2  LOW QUALITY PROTEIN: protein ABHD18

    UniProtKB/TrEMBL
    A0A481BI01, A0A4X1VEH5, A0A5G2R8J6, A0A8D0XYB4
    Related
    ENSSSCP00000073593.1, ENSSSCT00000078515.1
    Conserved Domains (1) summary
    pfam09752
    Location:76 → 516
    DUF2048; Abhydrolase domain containing 18
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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