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DHX34 DExH-box helicase 34 [ Sus scrofa (pig) ]

Gene ID: 100515780, updated on 8-Mar-2024

Summary

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Official Symbol
DHX34provided by VGNC
Official Full Name
DExH-box helicase 34provided by VGNC
Primary source
VGNC:VGNC:87291
See related
Ensembl:ENSSSCG00000003114
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in ovary (RPKM 9.7), lung (RPKM 7.7) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See DHX34 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
17
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (53131193..53161369)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 6 NC_010448.3 (48557169..48587313)

Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene complement C5a receptor 1 Neighboring gene complement C5a receptor 2 Neighboring gene Meis homeobox 3 Neighboring gene solute carrier family 8 member A2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX34
Names
DEAH-box helicase 34

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

    Range
    53131193..53161369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003127246.5 → XP_003127294.2  LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX34

    UniProtKB/TrEMBL
    A0A4X1W0G4
    Related
    ENSSSCP00000037302.2, ENSSSCT00000039609.3
    Conserved Domains (2) summary
    COG1643
    Location:155 → 684
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    pfam07717
    Location:791 → 908
    OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
Nucleotide Protein
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Molecular Biology Databases
Research Materials