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SERTAD4 SERTA domain containing 4 [ Sus scrofa (pig) ]

Gene ID: 100511654, updated on 8-Mar-2024

Summary

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Official Symbol
SERTAD4provided by VGNC
Official Full Name
SERTA domain containing 4provided by VGNC
Primary source
VGNC:VGNC:92752
See related
Ensembl:ENSSSCG00000026404
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Broad expression in ovary (RPKM 2.0), lung (RPKM 1.9) and 7 other tissues See more
Orthologs
human mouse all
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Genomic context

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See SERTAD4 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 9 NC_010451.4 (132737291..132748443, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 9 NC_010451.3 (145772676..145783649, complement)

Chromosome 9 - NC_010451.4Genomic Context describing neighboring genes Neighboring gene hedgehog acyltransferase Neighboring gene uncharacterized LOC110255536 Neighboring gene uncharacterized LOC106505054 Neighboring gene synaptotagmin 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SERTA domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010451.4 Reference Sscrofa11.1 Primary Assembly

    Range
    132737291..132748443 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003130419.4 → XP_003130467.1  SERTA domain-containing protein 4

    See identical proteins and their annotated locations for XP_003130467.1

    UniProtKB/TrEMBL
    A0A4X1TIM1, A0A8D0T8L7, A0A8D0TW23, I3LUP4
    Related
    ENSSSCP00000027844.1, ENSSSCT00000027635.4
    Conserved Domains (1) summary
    pfam06031
    Location:108 → 143
    SERTA; SERTA motif

  2. XM_005667880.3 → XP_005667937.1  SERTA domain-containing protein 4

    See identical proteins and their annotated locations for XP_005667937.1

    UniProtKB/TrEMBL
    A0A4X1TIM1, A0A8D0T8L7, A0A8D0TW23, I3LUP4
    Conserved Domains (1) summary
    pfam06031
    Location:108 → 143
    SERTA; SERTA motif

  3. XM_005667881.3 → XP_005667938.1  SERTA domain-containing protein 4

    See identical proteins and their annotated locations for XP_005667938.1

    UniProtKB/TrEMBL
    A0A4X1TIM1, A0A8D0T8L7, A0A8D0TW23, I3LUP4
    Conserved Domains (1) summary
    pfam06031
    Location:108 → 143
    SERTA; SERTA motif

  4. XM_013979995.2 → XP_013835449.1  SERTA domain-containing protein 4

    UniProtKB/TrEMBL
    A0A4X1TIM1, A0A8D0T8L7, A0A8D0TW23, I3LUP4
    Conserved Domains (1) summary
    pfam06031
    Location:108 → 143
    SERTA; SERTA motif

  5. XM_013979994.2 → XP_013835448.1  SERTA domain-containing protein 4

    UniProtKB/TrEMBL
    A0A4X1TIM1, A0A8D0T8L7, A0A8D0TW23, I3LUP4
    Conserved Domains (1) summary
    pfam06031
    Location:108 → 143
    SERTA; SERTA motif

  6. XM_013979993.2 → XP_013835447.1  SERTA domain-containing protein 4

    UniProtKB/TrEMBL
    A0A4X1TIM1, A0A8D0T8L7, A0A8D0TW23, I3LUP4
    Conserved Domains (1) summary
    pfam06031
    Location:108 → 143
    SERTA; SERTA motif
Nucleotide Protein
Heading Accession and Version

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