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cfap100 cilia and flagella associated protein 100 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100494556, updated on 18-Sep-2024

Summary

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Official Symbol
cfap100provided by Xenbase
Official Full Name
cilia and flagella associated protein 100provided by Xenbase
Primary source
Xenbase:XB-GENE-991284
See related
Ensembl:ENSXETG00000011548
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
ccdc37
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (133019124..133030123, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (122532574..122543646, complement)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene urocanate hydratase 1 Neighboring gene ZXD family zinc finger C Neighboring gene KLF transcription factor 15 Neighboring gene uncharacterized LOC116410471

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in motile cilium IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
cilia- and flagella-associated protein 100
Names
coiled-coil domain containing 37

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    133019124..133030123 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012961780.3 → XP_012817234.1  cilia- and flagella-associated protein 100

    See identical proteins and their annotated locations for XP_012817234.1

    UniProtKB/TrEMBL
    A0A7D9NL71
    Conserved Domains (2) summary
    PTZ00121
    Location:114 → 606
    PTZ00121; MAEBL; Provisional
    pfam13863
    Location:160 → 278
    DUF4200; Domain of unknown function (DUF4200)

  2. XM_012961779.3 → XP_012817233.1  cilia- and flagella-associated protein 100

    See identical proteins and their annotated locations for XP_012817233.1

    UniProtKB/TrEMBL
    A0A7D9NL71
    Related
    ENSXETP00000025275.4, ENSXETT00000025275.4
    Conserved Domains (2) summary
    PTZ00121
    Location:114 → 606
    PTZ00121; MAEBL; Provisional
    pfam13863
    Location:160 → 278
    DUF4200; Domain of unknown function (DUF4200)

  3. XM_012961781.3 → XP_012817235.1  cilia- and flagella-associated protein 100

    See identical proteins and their annotated locations for XP_012817235.1

    UniProtKB/TrEMBL
    A0A7D9NL71
    Conserved Domains (2) summary
    PTZ00121
    Location:114 → 606
    PTZ00121; MAEBL; Provisional
    pfam13863
    Location:160 → 278
    DUF4200; Domain of unknown function (DUF4200)
Nucleotide Protein Strain
Heading Accession and Version

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