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trap1 TNF receptor-associated protein 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100492593, updated on 17-Aug-2024

Summary

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Official Symbol
trap1provided by Xenbase
Official Full Name
TNF receptor-associated protein 1provided by Xenbase
Primary source
Xenbase:XB-GENE-999249
See related
Ensembl:ENSXETG00000033239
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
hsp75; hsp90l; xtrap1
Orthologs
human mouse all
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Genomic context

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See trap1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
18
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (20655960..20672455)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (14790401..14805817)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene adenylate cyclase 9 Neighboring gene CREB binding protein Neighboring gene SLX4 structure-specific endonuclease subunit Neighboring gene NLR family, CARD domain containing 3 Neighboring gene clusterin associated protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
  
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein folding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
heat shock protein 75 kDa, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    20655960..20672455
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002932460.5 → XP_002932506.1  heat shock protein 75 kDa, mitochondrial

    UniProtKB/TrEMBL
    A0A6I8RDG5, A0A6I8RV38
    Related
    ENSXETP00000083570.1, ENSXETT00000074569.2
    Conserved Domains (1) summary
    PRK05218
    Location:92 → 707
    PRK05218; heat shock protein 90; Provisional
Nucleotide Protein Strain
Heading Accession and Version

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