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akna AT-hook transcription factor [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100486577, updated on 17-Aug-2024

Summary

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Official Symbol
aknaprovided by Xenbase
Official Full Name
AT-hook transcription factorprovided by Xenbase
Primary source
Xenbase:XB-GENE-22067981
See related
Ensembl:ENSXETG00000036617
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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See akna in Genome Data Viewer
Location:
chromosome: 8
Exon count:
26
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (31925871..31946750)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (11960153..11980718)

Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 Neighboring gene whirlin Neighboring gene syntaxin binding protein 1 Neighboring gene niban apoptosis regulator 2 Neighboring gene solute carrier family 31 member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
microtubule organization protein AKNA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    31925871..31946750
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031890877.1 → XP_031746737.1  microtubule organization protein AKNA isoform X1

    UniProtKB/TrEMBL
    A0A6I8SBB5
    Related
    ENSXETP00000094217.2, ENSXETT00000073043.2

  2. XM_004916725.4 → XP_004916782.1  microtubule organization protein AKNA isoform X1

    UniProtKB/TrEMBL
    A0A6I8SBB5
    Related
    ENSXETP00000117005.1, ENSXETT00000118000.1

  3. XM_012969313.3 → XP_012824767.1  microtubule organization protein AKNA isoform X2

    UniProtKB/TrEMBL
    A0A6I8SYI2
    Related
    ENSXETP00000100443.2, ENSXETT00000080526.2

  4. XM_031890878.1 → XP_031746738.1  microtubule organization protein AKNA isoform X1

    UniProtKB/TrEMBL
    A0A6I8SBB5
    Related
    ENSXETP00000113007.1, ENSXETT00000109836.1

  5. XM_031890881.1 → XP_031746741.1  microtubule organization protein AKNA isoform X1

    UniProtKB/TrEMBL
    A0A6I8SBB5

  6. XM_031890882.1 → XP_031746742.1  microtubule organization protein AKNA isoform X1

    UniProtKB/TrEMBL
    A0A6I8SBB5

  7. XM_031890879.1 → XP_031746739.1  microtubule organization protein AKNA isoform X1

    UniProtKB/TrEMBL
    A0A6I8SBB5
    Related
    ENSXETP00000105663.1, ENSXETT00000124283.1
Nucleotide Protein Strain
Heading Accession and Version

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