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PRELP proline and arginine rich end leucine rich repeat protein [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100484260, updated on 8-Mar-2024

Summary

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Gene symbol
PRELP
Gene description
proline and arginine rich end leucine rich repeat protein
Locus tag
PANDA_006647
See related
Ensembl:ENSAMEG00000000687
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See PRELP in Genome Data Viewer
Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 8 NC_048225.1 (102968577..102982481)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217533.1 (82970..96863)

Chromosome 8 - NC_048225.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117803457 Neighboring gene fibromodulin Neighboring gene opticin Neighboring gene uncharacterized LOC117803458 Neighboring gene ATPase plasma membrane Ca2+ transporting 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolargin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048225.1 Reference ASM200744v2 Primary Assembly

    Range
    102968577..102982481
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002918187.3 → XP_002918233.1  prolargin

    See identical proteins and their annotated locations for XP_002918233.1

    UniProtKB/TrEMBL
    D2H8Q9
    Related
    ENSAMEP00000000719.1, ENSAMET00000000743.2
    Conserved Domains (4) summary
    smart00013
    Location:69 → 104
    LRRNT; Leucine rich repeat N-terminal domain
    cd00116
    Location:142 → 360
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:101 → 124
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:99 → 159
    LRR_8; Leucine rich repeat
Nucleotide Protein
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