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IFTAP intraflagellar transport associated protein [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100483710, updated on 8-Mar-2024

Summary

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Gene symbol
IFTAP
Gene description
intraflagellar transport associated protein
Locus tag
PANDA_016207
See related
Ensembl:ENSAMEG00000013857
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Also known as
CUNH11orf74
Orthologs
human mouse all
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Genomic context

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See IFTAP in Genome Data Viewer
Location:
chromosome: 16
Exon count:
12
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 16 NC_048233.1 (66636765..66702716)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218392.1 (477765..539725)

Chromosome 16 - NC_048233.1Genomic Context describing neighboring genes Neighboring gene TNF receptor associated factor 6 Neighboring gene recombination activating 1 Neighboring gene recombination activating 2 Neighboring gene peptidyl-prolyl cis-trans isomerase A-like Neighboring gene frataxin, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables intraciliary transport particle A binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acrosome reaction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in 9+0 non-motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intraflagellar transport-associated protein
Names
chromosome unknown C11orf74 homolog
uncharacterized protein C11orf74 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048233.1 Reference ASM200744v2 Primary Assembly

    Range
    66636765..66702716
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002926500.4 → XP_002926546.1  intraflagellar transport-associated protein isoform X1

    See identical proteins and their annotated locations for XP_002926546.1

    UniProtKB/TrEMBL
    A0A7N5KR93, G1M5I8

  2. XM_019807242.2 → XP_019662801.1  intraflagellar transport-associated protein isoform X2

  3. XM_034645410.1 → XP_034501301.1  intraflagellar transport-associated protein isoform X1

    UniProtKB/TrEMBL
    A0A7N5KR93, G1M5I8

  4. XM_034645411.1 → XP_034501302.1  intraflagellar transport-associated protein isoform X1

    UniProtKB/TrEMBL
    A0A7N5KR93, G1M5I8

  5. XM_011233917.3 → XP_011232219.1  intraflagellar transport-associated protein isoform X1

    See identical proteins and their annotated locations for XP_011232219.1

    UniProtKB/TrEMBL
    A0A7N5KR93, G1M5I8

  6. XM_019807241.2 → XP_019662800.1  intraflagellar transport-associated protein isoform X1

    UniProtKB/TrEMBL
    A0A7N5KR93, G1M5I8

  7. XM_034645412.1 → XP_034501303.1  intraflagellar transport-associated protein isoform X1

    UniProtKB/TrEMBL
    A0A7N5KR93, G1M5I8
    Related
    ENSAMEP00000014606.1, ENSAMET00000015212.2

RNA

  1. XR_004621292.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials