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SHROOM2 shroom family member 2 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100482897, updated on 8-Mar-2024

Summary

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Gene symbol
SHROOM2
Gene description
shroom family member 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
11
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) X NC_048238.1 (7259227..7412155)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219948.1 (7093..94247, complement)

Chromosome X - NC_048238.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 143 Neighboring gene uncharacterized LOC117797424 Neighboring gene transfer RNA valine (anticodon UAC) Neighboring gene WWC family member 3 Neighboring gene chloride voltage-gated channel 4 Neighboring gene uncharacterized LOC117797497 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apical junction complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Shroom2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048238.1 Reference ASM200744v2 Primary Assembly

    Range
    7259227..7412155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034649886.1 → XP_034505777.1  protein Shroom2

    UniProtKB/TrEMBL
    G1LE86
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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