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PSMA1 proteasome 20S subunit alpha 1 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100482015, updated on 8-Mar-2024

Summary

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Gene symbol
PSMA1
Gene description
proteasome 20S subunit alpha 1
Locus tag
PANDA_012479
See related
Ensembl:ENSAMEG00000002440
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 16 NC_048233.1 (47840452..47852692, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217969.1 (699340..711592, complement)

Chromosome 16 - NC_048233.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117796732 Neighboring gene COPI coat complex subunit beta 1 Neighboring gene uncharacterized LOC117796795 Neighboring gene phosphodiesterase 3B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, alpha-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome subunit alpha type-1
Names
proteasome subunit alpha 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048233.1 Reference ASM200744v2 Primary Assembly

    Range
    47840452..47852692 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002923304.4 → XP_002923350.1  proteasome subunit alpha type-1

    See identical proteins and their annotated locations for XP_002923350.1

    UniProtKB/TrEMBL
    A0A7N5JM49, G1L6T1
    Related
    ENSAMEP00000027424.1, ENSAMET00000041924.1
    Conserved Domains (1) summary
    cd03749
    Location:6 → 216
    proteasome_alpha_type_1; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...
Nucleotide Protein
Heading Accession and Version

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