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BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100467307, updated on 8-Mar-2024

Summary

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Gene symbol
BDP1
Gene description
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
Locus tag
PANDA_003976
See related
Ensembl:ENSAMEG00000003347
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
40
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 3 NC_048220.1 (47610942..47692438)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217398.1 (2489793..2572904)

Chromosome 3 - NC_048220.1Genomic Context describing neighboring genes Neighboring gene survival motor neuron protein Neighboring gene small nucleolar RNA SNORA1 Neighboring gene uncharacterized LOC100465820 Neighboring gene methylcrotonyl-CoA carboxylase subunit 2 Neighboring gene 60S ribosomal protein L27a-like Neighboring gene 60S ribosomal protein L19-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables TFIIIC-class transcription factor complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA polymerase III preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIIB complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor TFIIIB component B'' homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048220.1 Reference ASM200744v2 Primary Assembly

    Range
    47610942..47692438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011220600.3 → XP_011218902.1  transcription factor TFIIIB component B'' homolog isoform X1

    UniProtKB/TrEMBL
    D2H2U9
    Related
    ENSAMEP00000003557.2, ENSAMET00000003695.2
    Conserved Domains (1) summary
    pfam15963
    Location:298 → 381
    Myb_DNA-bind_7; Myb DNA-binding like

  2. XM_034656329.1 → XP_034512220.1  transcription factor TFIIIB component B'' homolog isoform X2

    UniProtKB/TrEMBL
    D2H2U9
Nucleotide Protein
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Gene LinkOut

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