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TMEM38B transmembrane protein 38B [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100466690, updated on 8-Mar-2024

Summary

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Gene symbol
TMEM38B
Gene description
transmembrane protein 38B
Locus tag
PANDA_017526
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See TMEM38B in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 7 NC_048224.1 (34513062..34565847)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218606.1 (405308..457668)

Chromosome 7 - NC_048224.1Genomic Context describing neighboring genes Neighboring gene fibronectin type III and SPRY domain containing 1 like Neighboring gene fukutin Neighboring gene 10 kDa heat shock protein, mitochondrial-like Neighboring gene zinc finger protein 462 Neighboring gene uncharacterized LOC117802997

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trimeric intracellular cation channel type B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048224.1 Reference ASM200744v2 Primary Assembly

    Range
    34513062..34565847
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002927670.4 → XP_002927716.1  trimeric intracellular cation channel type B isoform X1

    See identical proteins and their annotated locations for XP_002927716.1

    UniProtKB/TrEMBL
    D2HXY1
    Conserved Domains (1) summary
    pfam05197
    Location:39 → 222
    TRIC; TRIC channel

  2. XM_034664228.1 → XP_034520119.1  trimeric intracellular cation channel type B isoform X2

Nucleotide Protein
Heading Accession and Version

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