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SELENOH selenoprotein H [ Sus scrofa (pig) ]

Gene ID: 100462651, updated on 8-Mar-2024

Summary

Official Symbol
SELENOHprovided by VGNC
Official Full Name
selenoprotein Hprovided by VGNC
Primary source
VGNC:VGNC:100857
See related
Ensembl:ENSSSCG00000032364
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as
SELH; C2H11orf31
Expression
Ubiquitous expression in ovary (RPKM 98.1), spleen (RPKM 64.0) and 8 other tissues See more
Orthologs
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Genomic context

See SELENOH in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 2 NC_010444.4 (13229296..13229879, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 2 NC_010444.3 (12862307..12862890, complement)

Chromosome 2 - NC_010444.4Genomic Context describing neighboring genes Neighboring gene catenin delta 1 Neighboring gene BTB domain containing 18 Neighboring gene thioredoxin related transmembrane protein 2 Neighboring gene mediator complex subunit 19

Genomic regions, transcripts, and products

Expression

  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001184948.1NP_001171877.1  selenoprotein H

    See identical proteins and their annotated locations for NP_001171877.1

    Status: VALIDATED

    Source sequence(s)
    HM018602
    UniProtKB/TrEMBL
    A0A8D1RAU0, D6QZ31
    Related
    ENSSSCP00000042612.1, ENSSSCT00000043568.2
    Conserved Domains (1) summary
    TIGR02174
    Location:36119
    CXXU_selWTH; selT/selW/selH selenoprotein domain

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010444.4 Reference Sscrofa11.1 Primary Assembly

    Range
    13229296..13229879 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)