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ZSWIM5 zinc finger SWIM-type containing 5 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100459209, updated on 26-Mar-2024

Summary

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Gene symbol
ZSWIM5
Gene description
zinc finger SWIM-type containing 5
Locus tag
CR201_G0041892
See related
Ensembl:ENSPPYG00000001418
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 1 NC_071985.2 (188005919..188287123)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 1 NC_071985.1 (187888534..188169738)

Chromosome 1 - NC_071985.2Genomic Context describing neighboring genes Neighboring gene mutY DNA glycosylase Neighboring gene target of EGR1, exonuclease Neighboring gene 4-hydroxyphenylpyruvate dioxygenase like Neighboring gene oligosaccharyltransferase complex subunit OSTC-like Neighboring gene uncharacterized LOC129051113 Neighboring gene small ribosomal subunit protein uS17m-like Neighboring gene HECT domain E3 ubiquitin protein ligase 3 Neighboring gene uroporphyrinogen decarboxylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul2-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger SWIM domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071985.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    188005919..188287123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054535682.1 → XP_054391657.1  zinc finger SWIM domain-containing protein 5 isoform X3

  2. XM_002810905.4 → XP_002810951.2  zinc finger SWIM domain-containing protein 5 isoform X1

  3. XM_054535675.2 → XP_054391650.1  zinc finger SWIM domain-containing protein 5 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Miscellaneous