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BAZ2A bromodomain adjacent to zinc finger domain 2A [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100457132, updated on 3-Apr-2024

Summary

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Gene symbol
BAZ2A
Gene description
bromodomain adjacent to zinc finger domain 2A
Locus tag
CR201_G0027798
See related
Ensembl:ENSPPYG00000004667
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See BAZ2A in Genome Data Viewer
Location:
chromosome: 10
Exon count:
38
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 10 NC_071995.2 (54506970..54547609, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 12 NC_071997.1 (54507838..54548477, complement)

Chromosome 10 - NC_071995.2Genomic Context describing neighboring genes Neighboring gene 60 kDa heat shock protein, mitochondrial-like Neighboring gene RNA binding motif single stranded interacting protein 2 Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORD59 Neighboring gene small nucleolar RNA SNORD59 Neighboring gene ATP synthase F1 subunit beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of rDNA heterochromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bromodomain adjacent to zinc finger domain protein 2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071995.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    54506970..54547609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054528097.1 → XP_054384072.1  bromodomain adjacent to zinc finger domain protein 2A isoform X11

  2. XM_054528091.1 → XP_054384066.1  bromodomain adjacent to zinc finger domain protein 2A isoform X5

  3. XM_054528092.1 → XP_054384067.1  bromodomain adjacent to zinc finger domain protein 2A isoform X5

  4. XM_009247920.4 → XP_009246195.1  bromodomain adjacent to zinc finger domain protein 2A isoform X6

    See identical proteins and their annotated locations for XP_009246195.1

    Conserved Domains (7) summary
    cd05503
    Location:1807 → 1903
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:846 → 910
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:549 → 621
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:1687 → 1733
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:1441 → 1475
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26170
    Location:390 → 522
    DUF4115; Domain of unknown function (DUF4115)
    cl27975
    Location:1329 → 1432
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)

  5. XM_063711837.1 → XP_063567907.1  bromodomain adjacent to zinc finger domain protein 2A isoform X7

    UniProtKB/TrEMBL
    A0A2J8UHL0, H2NHQ8

  6. XM_063711841.1 → XP_063567911.1  bromodomain adjacent to zinc finger domain protein 2A isoform X13

  7. XM_054528098.2 → XP_054384073.1  bromodomain adjacent to zinc finger domain protein 2A isoform X12

  8. XM_063711842.1 → XP_063567912.1  bromodomain adjacent to zinc finger domain protein 2A isoform X14

  9. XM_063711835.1 → XP_063567905.1  bromodomain adjacent to zinc finger domain protein 2A isoform X6

  10. XM_009247921.4 → XP_009246196.1  bromodomain adjacent to zinc finger domain protein 2A isoform X6

    See identical proteins and their annotated locations for XP_009246196.1

    Conserved Domains (7) summary
    cd05503
    Location:1807 → 1903
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:846 → 910
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:549 → 621
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:1687 → 1733
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:1441 → 1475
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26170
    Location:390 → 522
    DUF4115; Domain of unknown function (DUF4115)
    cl27975
    Location:1329 → 1432
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)

  11. XM_024256641.2 → XP_024112409.1  bromodomain adjacent to zinc finger domain protein 2A isoform X15

    Conserved Domains (7) summary
    cd05503
    Location:1652 → 1748
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:691 → 755
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:394 → 466
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:1532 → 1578
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:1286 → 1320
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26170
    Location:235 → 367
    DUF4115; Domain of unknown function (DUF4115)
    cl27975
    Location:1174 → 1277
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)

  12. XM_063711840.1 → XP_063567910.1  bromodomain adjacent to zinc finger domain protein 2A isoform X9

  13. XM_063711839.1 → XP_063567909.1  bromodomain adjacent to zinc finger domain protein 2A isoform X3

    UniProtKB/TrEMBL
    A0A2J8UHQ4, A0A6D2XTK9, H2NHQ9

  14. XM_063711834.1 → XP_063567904.1  bromodomain adjacent to zinc finger domain protein 2A isoform X6

  15. XM_024256636.3 → XP_024112404.1  bromodomain adjacent to zinc finger domain protein 2A isoform X6

    Conserved Domains (7) summary
    cd05503
    Location:1807 → 1903
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:846 → 910
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:549 → 621
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:1687 → 1733
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:1441 → 1475
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26170
    Location:390 → 522
    DUF4115; Domain of unknown function (DUF4115)
    cl27975
    Location:1329 → 1432
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)

  16. XM_009247923.4 → XP_009246198.1  bromodomain adjacent to zinc finger domain protein 2A isoform X6

    See identical proteins and their annotated locations for XP_009246198.1

    Conserved Domains (7) summary
    cd05503
    Location:1807 → 1903
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:846 → 910
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:549 → 621
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:1687 → 1733
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15613
    Location:1441 → 1475
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl26170
    Location:390 → 522
    DUF4115; Domain of unknown function (DUF4115)
    cl27975
    Location:1329 → 1432
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)

  17. XM_054528099.2 → XP_054384074.1  bromodomain adjacent to zinc finger domain protein 2A isoform X15

  18. XM_063711836.1 → XP_063567906.1  bromodomain adjacent to zinc finger domain protein 2A isoform X6

  19. XM_054528093.1 → XP_054384068.1  bromodomain adjacent to zinc finger domain protein 2A isoform X6

  20. XM_054528090.1 → XP_054384065.1  bromodomain adjacent to zinc finger domain protein 2A isoform X4

  21. XM_054528087.1 → XP_054384062.1  bromodomain adjacent to zinc finger domain protein 2A isoform X1

  22. XM_054528095.1 → XP_054384070.1  bromodomain adjacent to zinc finger domain protein 2A isoform X10

  23. XM_063711838.1 → XP_063567908.1  bromodomain adjacent to zinc finger domain protein 2A isoform X8

  24. XM_054528089.1 → XP_054384064.1  bromodomain adjacent to zinc finger domain protein 2A isoform X3

    UniProtKB/TrEMBL
    A0A2J8UHQ4, A0A6D2XTK9, H2NHQ9

  25. XM_054528088.1 → XP_054384063.1  bromodomain adjacent to zinc finger domain protein 2A isoform X2

Nucleotide Protein
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