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NUDCD2 NudC domain containing 2 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100447184, updated on 26-Mar-2024

Summary

Gene symbol
NUDCD2
Gene description
NudC domain containing 2
Locus tag
CR201_G0004696
See related
Ensembl:ENSPPYG00000016018
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
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Genomic context

See NUDCD2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 4 NC_071989.2 (172271641..172287131, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 5 NC_071990.1 (171481795..171488616, complement)

Chromosome 4 - NC_071989.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene ADP-ribosylation factor-like protein 2-binding protein Neighboring gene cyclin G1 Neighboring gene hyaluronan mediated motility receptor Neighboring gene methionine adenosyltransferase 2 non-catalytic beta subunit

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
nudC domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071989.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    172271641..172287131 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002816161.6XP_002816207.1  nudC domain-containing protein 2

    See identical proteins and their annotated locations for XP_002816207.1

    UniProtKB/TrEMBL
    A0A2J8X734, A0A2J8X756, A0A6D2XHY5, H2PHA6
    Related
    ENSPPYP00000017927.2
    Conserved Domains (1) summary
    cd06494
    Location:12104
    p23_NUDCD2_like; p23-like NUD (nuclear distribution) C-like found in human NUDC domain-containing protein 2 (NUDCD2) and similar proteins. Little is known about the function of the proteins in this subgroup.