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PSMC4 proteasome 26S subunit, ATPase 4 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100441277, updated on 26-Mar-2024

Summary

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Gene symbol
PSMC4
Gene description
proteasome 26S subunit, ATPase 4
Locus tag
CR201_G0043970
See related
Ensembl:ENSPPYG00000009982
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See PSMC4 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 20 NC_072005.2 (45760743..45771516)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 19 NC_072004.1 (52111332..52122095)

Chromosome 20 - NC_072005.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134760646 Neighboring gene Fc gamma binding protein Neighboring gene charged multivesicular body protein 2a-like Neighboring gene uncharacterized LOC129051773 Neighboring gene uncharacterized LOC129051772 Neighboring gene zinc finger protein 546 Neighboring gene protein PAT1 homolog 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome-activating activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proteasome regulatory particle, base subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
26S proteasome regulatory subunit 6B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072005.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    45760743..45771516
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003779182.4 → XP_003779230.1  26S proteasome regulatory subunit 6B isoform X3

    See identical proteins and their annotated locations for XP_003779230.1

    UniProtKB/TrEMBL
    A0A2J8SDU0, A0A663DHG3, H2NYU2
    Related
    ENSPPYP00000011174.2
    Conserved Domains (1) summary
    PTZ00454
    Location:34 → 418
    PTZ00454; 26S protease regulatory subunit 6B-like protein; Provisional

  2. XM_054538909.2 → XP_054394884.1  26S proteasome regulatory subunit 6B isoform X1

  3. XM_054538911.2 → XP_054394886.1  26S proteasome regulatory subunit 6B isoform X4

  4. XM_054538910.2 → XP_054394885.1  26S proteasome regulatory subunit 6B isoform X2

Nucleotide Protein
Heading Accession and Version

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