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ITGA9 integrin subunit alpha 9 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100433501, updated on 3-Apr-2024

Summary

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Gene symbol
ITGA9
Gene description
integrin subunit alpha 9
Locus tag
CR201_G0006436
See related
Ensembl:ENSPPYG00000014017
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 2 NC_085928.1 (116688231..117075315, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 3 NC_071988.1 (104506392..104893913, complement)

Chromosome 2 - NC_085928.1Genomic Context describing neighboring genes Neighboring gene villin like Neighboring gene CTD small phosphatase like Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like Neighboring gene uncharacterized LOC129058593 Neighboring gene U7 small nuclear RNA Neighboring gene APRG1 tumor suppressor candidate Neighboring gene golgin A4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_085928.1 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    116688231..117075315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024245138.3 → XP_024100906.3  integrin alpha-9 isoform X2

    UniProtKB/TrEMBL
    A0A2J8WYD1, A0A6D2W5R2, H2PB64

  2. XM_054552331.2 → XP_054408306.2  integrin alpha-9 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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