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DNAJC18 DnaJ heat shock protein family (Hsp40) member C18 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100412669, updated on 8-Mar-2024

Summary

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Gene symbol
DNAJC18
Gene description
DnaJ heat shock protein family (Hsp40) member C18
See related
Ensembl:ENSCJAG00000007083
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 2 NC_071443.1 (35841273..35878537, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 2 NC_048384.1 (36116549..36153813, complement)

Chromosome 2 - NC_071443.1Genomic Context describing neighboring genes Neighboring gene proline rich basic protein 1 Neighboring gene spermatogenesis associated 24 Neighboring gene U5 spliceosomal RNA Neighboring gene endothelial cell surface expressed chemotaxis and apoptosis regulator

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to misfolded protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chaperone cofactor-dependent protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily C member 18
Names
DnaJ (Hsp40) homolog, subfamily C, member 18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071443.1 Reference mCalJa1.2.pat.X

    Range
    35841273..35878537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035292149.2 → XP_035148040.1  dnaJ homolog subfamily C member 18 isoform X2

    Conserved Domains (2) summary
    TIGR02349
    Location:83 → 187
    DnaJ_bact; chaperone protein DnaJ
    pfam09320
    Location:250 → 344
    DUF1977; Domain of unknown function (DUF1977)

  2. XM_035292148.2 → XP_035148039.1  dnaJ homolog subfamily C member 18 isoform X1

    UniProtKB/TrEMBL
    A0A2R8MEQ4, F7CFT4
    Conserved Domains (2) summary
    TIGR02349
    Location:83 → 187
    DnaJ_bact; chaperone protein DnaJ
    pfam09320
    Location:250 → 350
    DUF1977; Domain of unknown function (DUF1977)
Nucleotide Protein
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