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ANKRD52 ankyrin repeat domain 52 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100412386, updated on 8-Mar-2024

Summary

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Gene symbol
ANKRD52
Gene description
ankyrin repeat domain 52
See related
Ensembl:ENSCJAG00000011349
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See ANKRD52 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 9 NC_071450.1 (59822271..59843581)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 9 NC_048391.1 (60948163..60969453)

Chromosome 9 - NC_071450.1Genomic Context describing neighboring genes Neighboring gene coenzyme Q10A Neighboring gene SRA stem-loop-interacting RNA-binding protein, mitochondrial-like Neighboring gene solute carrier family 39 member 5 Neighboring gene nucleic acid binding protein 2 Neighboring gene ring finger protein 41 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071450.1 Reference mCalJa1.2.pat.X

    Range
    59822271..59843581
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054238412.1 → XP_054094387.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X2

  2. XM_035256430.2 → XP_035112321.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X1

    UniProtKB/TrEMBL
    F6UX12
    Conserved Domains (5) summary
    PTZ00322
    Location:962 → 1029
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02876
    Location:148 → 493
    PHA02876; ankyrin repeat protein; Provisional
    PHA03095
    Location:20 → 317
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:108 → 137
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:532 → 615
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
Heading Accession and Version

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