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ABCG2 ATP binding cassette subfamily G member 2 (JR blood group) [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100411493, updated on 6-Jun-2024

Summary

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Gene symbol
ABCG2
Gene description
ATP binding cassette subfamily G member 2 (JR blood group)
See related
Ensembl:ENSCJAG00000006370
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See ABCG2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 3 NC_071444.1 (105636262..105688940)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 3 NC_048385.1 (108184583..108315078)

Chromosome 3 - NC_071444.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC118152249 Neighboring gene polycystin 2, transient receptor potential cation channel Neighboring gene uncharacterized LOC103791955 Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
broad substrate specificity ATP-binding cassette transporter ABCG2
Names
ATP binding cassette subfamily G member 2 (Junior blood group)
ATP-binding cassette sub-family G member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071444.1 Reference mCalJa1.2.pat.X

    Range
    105636262..105688940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008993003.4 → XP_008991251.1  broad substrate specificity ATP-binding cassette transporter ABCG2

    See identical proteins and their annotated locations for XP_008991251.1

    UniProtKB/TrEMBL
    F7D5A9, U3EDG4
    Related
    ENSCJAP00000042824.1
    Conserved Domains (1) summary
    TIGR00955
    Location:56 → 649
    3a01204; The Eye Pigment Precursor Transporter (EPP) Family protein

  2. XM_035293338.2 → XP_035149229.1  broad substrate specificity ATP-binding cassette transporter ABCG2

    UniProtKB/TrEMBL
    F7D5A9, U3EDG4
    Conserved Domains (1) summary
    TIGR00955
    Location:56 → 649
    3a01204; The Eye Pigment Precursor Transporter (EPP) Family protein

  3. XM_054253161.1 → XP_054109136.1  broad substrate specificity ATP-binding cassette transporter ABCG2

    UniProtKB/TrEMBL
    F7D5A9, U3EDG4
Nucleotide Protein
Heading Accession and Version

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