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ZER1 zyg-11 related cell cycle regulator [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100410271, updated on 8-Mar-2024

Summary

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Gene symbol
ZER1
Gene description
zyg-11 related cell cycle regulator
See related
Ensembl:ENSCJAG00000020189
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See ZER1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 1 NC_071442.1 (174382313..174424026, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 1 NC_048383.1 (175586376..175628076, complement)

Chromosome 1 - NC_071442.1Genomic Context describing neighboring genes Neighboring gene SET nuclear proto-oncogene Neighboring gene protein kinase N3 Neighboring gene uncharacterized LOC118144845 Neighboring gene zinc finger DHHC-type palmitoyltransferase 12 Neighboring gene small nucleolar RNA U13 Neighboring gene TBC1 domain family member 13 Neighboring gene endonuclease G Neighboring gene SPOUT domain containing methyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul2-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein zer-1 homolog
Names
zer-1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071442.1 Reference mCalJa1.2.pat.X

    Range
    174382313..174424026 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035259668.2 → XP_035115559.1  protein zer-1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2R8MXM8, U3DDU9
    Conserved Domains (3) summary
    sd00033
    Location:281 → 324
    LRR_RI; leucine-rich repeat [structural motif]
    sd00034
    Location:82 → 104
    LRR_AMN1; leucine-rich repeat [structural motif]
    NF033190
    Location:179 → 336
    inl_like_NEAT_1; NEAT domain-containing leucine-rich repeat protein

  2. XM_003732057.5 → XP_003732105.1  protein zer-1 homolog isoform X1

    See identical proteins and their annotated locations for XP_003732105.1

    UniProtKB/TrEMBL
    A0A2R8MXM8, F6VZQ0
    Conserved Domains (3) summary
    sd00033
    Location:281 → 324
    LRR_RI; leucine-rich repeat [structural motif]
    sd00034
    Location:82 → 104
    LRR_AMN1; leucine-rich repeat [structural motif]
    NF033190
    Location:179 → 336
    inl_like_NEAT_1; NEAT domain-containing leucine-rich repeat protein

  3. XM_035259653.2 → XP_035115544.1  protein zer-1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A2R8MXM8, F6VZQ0
    Conserved Domains (3) summary
    sd00033
    Location:281 → 324
    LRR_RI; leucine-rich repeat [structural motif]
    sd00034
    Location:82 → 104
    LRR_AMN1; leucine-rich repeat [structural motif]
    NF033190
    Location:179 → 336
    inl_like_NEAT_1; NEAT domain-containing leucine-rich repeat protein

  4. XM_009003643.4 → XP_009001891.1  protein zer-1 homolog isoform X2

    See identical proteins and their annotated locations for XP_009001891.1

    UniProtKB/TrEMBL
    A0A2R8MXM8, U3DDU9
    Conserved Domains (3) summary
    sd00033
    Location:281 → 324
    LRR_RI; leucine-rich repeat [structural motif]
    sd00034
    Location:82 → 104
    LRR_AMN1; leucine-rich repeat [structural motif]
    NF033190
    Location:179 → 336
    inl_like_NEAT_1; NEAT domain-containing leucine-rich repeat protein

  5. XM_002743361.5 → XP_002743407.1  protein zer-1 homolog isoform X1

    See identical proteins and their annotated locations for XP_002743407.1

    UniProtKB/TrEMBL
    A0A2R8MXM8, F6VZQ0
    Related
    ENSCJAP00000037561.2
    Conserved Domains (3) summary
    sd00033
    Location:281 → 324
    LRR_RI; leucine-rich repeat [structural motif]
    sd00034
    Location:82 → 104
    LRR_AMN1; leucine-rich repeat [structural motif]
    NF033190
    Location:179 → 336
    inl_like_NEAT_1; NEAT domain-containing leucine-rich repeat protein

  6. XM_035259650.2 → XP_035115541.1  protein zer-1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A2R8MXM8, F6VZQ0
    Conserved Domains (3) summary
    sd00033
    Location:281 → 324
    LRR_RI; leucine-rich repeat [structural motif]
    sd00034
    Location:82 → 104
    LRR_AMN1; leucine-rich repeat [structural motif]
    NF033190
    Location:179 → 336
    inl_like_NEAT_1; NEAT domain-containing leucine-rich repeat protein
Nucleotide Protein
Heading Accession and Version

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