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TIRAP TIR domain containing adaptor protein [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100409771, updated on 6-Jun-2024

Summary

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Gene symbol
TIRAP
Gene description
TIR domain containing adaptor protein
See related
Ensembl:ENSCJAG00000008886
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See TIRAP in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 11 NC_071452.1 (23708031..23723446)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 11 NC_048393.1 (23661483..23672716)

Chromosome 11 - NC_071452.1Genomic Context describing neighboring genes Neighboring gene FAD dependent oxidoreductase domain containing 1 Neighboring gene uncharacterized LOC128929097 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC103796071 Neighboring gene decapping enzyme, scavenger Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll/interleukin-1 receptor domain-containing adapter protein
Names
toll-interleukin 1 receptor (TIR) domain containing adaptor protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071452.1 Reference mCalJa1.2.pat.X

    Range
    23708031..23723446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035265030.2 → XP_035120921.2  toll/interleukin-1 receptor domain-containing adapter protein isoform X2

  2. XM_054241718.1 → XP_054097693.1  toll/interleukin-1 receptor domain-containing adapter protein isoform X1

    UniProtKB/TrEMBL
    A0A8I3X1G8

  3. XM_009007089.4 → XP_009005337.3  toll/interleukin-1 receptor domain-containing adapter protein isoform X1

    UniProtKB/TrEMBL
    A0A8I3X1G8

  4. XM_035265029.2 → XP_035120920.2  toll/interleukin-1 receptor domain-containing adapter protein isoform X1

    UniProtKB/TrEMBL
    A0A8I3X1G8

  5. XM_035265031.2 → XP_035120922.2  toll/interleukin-1 receptor domain-containing adapter protein isoform X3

    UniProtKB/TrEMBL
    F6WAL1, U3CTZ9

  6. XM_009007091.4 → XP_009005339.3  toll/interleukin-1 receptor domain-containing adapter protein isoform X2

Nucleotide Protein
Heading Accession and Version

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