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CDC45 cell division cycle 45 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100409434, updated on 8-Mar-2024

Summary

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Gene symbol
CDC45
Gene description
cell division cycle 45
See related
Ensembl:ENSCJAG00000001523
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See CDC45 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 1 NC_071442.1 (208612777..208657285)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 1 NC_048383.1 (209507837..209552355)

Chromosome 1 - NC_071442.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118147975 Neighboring gene ubiquitin recognition factor in ER associated degradation 1 Neighboring gene 5S ribosomal RNA Neighboring gene claudin 5 Neighboring gene hsc70-interacting protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA replication origin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via break-induced replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic DNA replication preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of DNA replication preinitiation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell division control protein 45 homolog
Names
CDC45 cell division cycle 45 homolog
cell division cycle 45 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071442.1 Reference mCalJa1.2.pat.X

    Range
    208612777..208657285
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002743541.5 → XP_002743587.1  cell division control protein 45 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8I3WWM5, F7IIN6
    Related
    ENSCJAP00000002789.2
    Conserved Domains (1) summary
    pfam02724
    Location:19 → 557
    CDC45; CDC45-like protein

  2. XM_035269295.2 → XP_035125186.1  cell division control protein 45 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8I3WWM5
    Conserved Domains (1) summary
    pfam02724
    Location:17 → 537
    CDC45; CDC45-like protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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