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MSL1 MSL complex subunit 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100409007, updated on 8-Mar-2024

Summary

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Gene symbol
MSL1
Gene description
MSL complex subunit 1
See related
Ensembl:ENSCJAG00000016012
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See MSL1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (67851407..67867121)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (70491186..70506908)

Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 1 group D member 1 Neighboring gene uncharacterized LOC128932087 Neighboring gene CASC3 exon junction complex subunit Neighboring gene cyclin-Q-like Neighboring gene Rap guanine nucleotide exchange factor like 1 Neighboring gene uncharacterized LOC118153696

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of MSL complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
male-specific lethal 1 homolog
Names
male specific lethal 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071446.1 Reference mCalJa1.2.pat.X

    Range
    67851407..67867121
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035299687.2 → XP_035155578.1  male-specific lethal 1 homolog isoform X1

    UniProtKB/TrEMBL
    F7IP38
    Conserved Domains (2) summary
    PTZ00108
    Location:243 → 429
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    pfam15275
    Location:473 → 591
    PEHE; PEHE domain

  2. XM_035299688.2 → XP_035155579.1  male-specific lethal 1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2R8N2Y4
    Conserved Domains (2) summary
    PTZ00108
    Location:243 → 485
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    pfam15275
    Location:459 → 575
    PEHE; PEHE domain

  3. XM_035299689.2 → XP_035155580.1  male-specific lethal 1 homolog isoform X3

    UniProtKB/TrEMBL
    U3F432
    Conserved Domains (1) summary
    pfam15275
    Location:210 → 328
    PEHE; PEHE domain
Nucleotide Protein
Heading Accession and Version

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